Insertion junction: CLIP2.005342_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005342
Chromosome:chromosome 12
Location:7612335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555951 PYRD1,RFD1 putative riboflavin metabolism-associated deaminase; (1 of 2) 3.5.4.26 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTTTGGCCCGATCGTTTTCCCGCGAATGCCGCGATGAGTGCACCCAT
Internal bar code:ATCTCATCGCGGAATCACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCATACTCGCTGCGTCA
Suggested primer 2:GAACGCGGCTTTCGAATCTC