Insertion junction: CLIP2.005353_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005353
Chromosome:chromosome 7
Location:4634081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344550 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTATGTACCGCATGTGTTTCCAGGTGTCGGACTACGTGACCGTGCACG
Internal bar code:GGGTGACTTGGGAGTGCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2342
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTTTAGTTTGCGTGCA
Suggested primer 2:AGAACGAACACCCTGCTCTG