Insertion junction: CLIP2.005353_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005353
Chromosome:chromosome 7
Location:4634101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344550 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCGACTCTCTCTCGCGCGCCTTCTCCTATGACAACTAAGCCGCACG
Internal bar code:GGGTGACTTGGGAGTGCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACGAACACCCTGCTCTG
Suggested primer 2:GCTGGTTTAGTTTGCGTGCA