Insertion junction: CLIP2.005385_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005385
Chromosome:chromosome 16
Location:3010473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663900 HMBS,PBGD1 (1 of 2) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase; Porphobilinogen deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGTATCGATACCGTAGATGAACTGAGCCCCGCGGCCGAGTGAGCCGC
Internal bar code:AATATAGGTTATGAGCGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3878
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTGTGTACATGGCTGT
Suggested primer 2:GCTTTTGACTTGACGCGTGT