Insertion junction: CLIP2.005407_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005407
Chromosome:chromosome 9
Location:933354
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g402950 CGL21 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTTAAGCCTCCGCCCTAGTCCTCAACGTCCCGAGCTCTCTCTTGAAC
Internal bar code:CATGCGTCTTGCAAGTAGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGAGGCGGAACTTGAC
Suggested primer 2:TCGACTGGTTGTTTCCTCCG