Insertion junction: CLIP2.005456_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005456
Chromosome:chromosome 16
Location:3010338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663900 HMBS,PBGD1 (1 of 2) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase; Porphobilinogen deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCGCTTGAACGCATGAAGCAGGACGTCGGTGCCGCACGATCGACAC
Internal bar code:GTCTTCGTTAGCGTCGCCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3828
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGACTTGACGCGTGT
Suggested primer 2:GTTGTACCGTCGTGTGGTCT