Insertion junction: CLIP2.005670_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005670
Chromosome:chromosome 11
Location:2654655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095077 (1 of 1) PF00571//PF04134 - CBS domain (CBS) // Protein of unknown function, DUF393 (DUF393) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTGTGTGATGTTGATTGACGCTTGCTAGCTGGGACCAGGTAGGGCGG
Internal bar code:GTACCTGGACTCCCAGTGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCCATCACACTCCCAC
Suggested primer 2:AGGATACCCTGCGACTCCTT