Gene: Cre02.g095077

Overview

Common name:
Defline:(1 of 1) PF00571//PF04134 - CBS domain (CBS) // Protein of unknown function, DUF393 (DUF393)
Description:
Synonyms:Cre11.g471550.t1.2,g1851.t1,Cre11.g471550.t1.1
Chromosome:chromosome 11 (genome version v6.1), chromosome 2 (genome version v5.5)

Protein Localization

A plasmid for expressing Cre02.g095077 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g095077-Venus-3xFLAG

Imaged strain: CSI_LW08A2

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/not homogeneous/pyrenoid depleted/enriched in thylakoid

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.002477_1 CLIP2.002477 intron 80 6.1
CLIP2.002477_2 CLIP2.002477 intron 80 6.1
CLIP2.004675_1 CLIP2.004675 CDS 80 6.1
CLIP2.004675_2 CLIP2.004675 CDS 80 6.1
CLIP2.004926_1 CLIP2.004926 5'UTR 80 6.1
CLIP2.004926_2 CLIP2.004926 5'UTR 80 6.1
CLIP2.005653_1 CLIP2.005653 CDS 80 6.1
CLIP2.005653_2 CLIP2.005653 CDS 80 6.1
CLIP2.005670_3 CLIP2.005670 5'UTR 80 6.1
CLIP2.005670_4 CLIP2.005670 5'UTR 80 6.1
CLIP2.045100_1 CLIP2.045100 5'UTR 63 6.1
LMJ.RY0402.060122_1 LMJ.RY0402.060122 CDS 95 5.5
LMJ.RY0402.060122_2 LMJ.RY0402.060122 CDS/5'UTR 95 5.5
LMJ.RY0402.065593_1 LMJ.RY0402.065593 3'UTR 73 5.5
LMJ.RY0402.077386_1 LMJ.RY0402.077386 3'UTR 73 5.5
LMJ.RY0402.092406_1 LMJ.RY0402.092406 3'UTR 95 5.5
LMJ.RY0402.092406_2 LMJ.RY0402.092406 3'UTR 95 5.5
LMJ.RY0402.109980_1 LMJ.RY0402.109980 5'UTR 73 5.5
LMJ.RY0402.111455_1 LMJ.RY0402.111455 3'UTR 73 5.5
LMJ.RY0402.124917_1 LMJ.RY0402.124917 CDS 58 5.5
LMJ.RY0402.124917_2 LMJ.RY0402.124917 5'UTR 73 5.5
LMJ.RY0402.149507_1 LMJ.RY0402.149507 CDS 73 5.5
LMJ.RY0402.160975_1 LMJ.RY0402.160975 3'UTR 95 5.5
LMJ.RY0402.160975_2 LMJ.RY0402.160975 3'UTR 95 5.5
LMJ.RY0402.188192_1 LMJ.RY0402.188192 3'UTR 58 5.5
LMJ.RY0402.188836_1 LMJ.RY0402.188836 intron 73 5.5
LMJ.RY0402.191574_1 LMJ.RY0402.191574 intron 95 5.5
LMJ.RY0402.191574_2 LMJ.RY0402.191574 intron 95 5.5
LMJ.RY0402.195781_1 LMJ.RY0402.195781 3'UTR 95 5.5
LMJ.RY0402.195781_2 LMJ.RY0402.195781 3'UTR 95 5.5
LMJ.RY0402.201105_1 LMJ.RY0402.201105 3'UTR 73 5.5
LMJ.RY0402.215925_1 LMJ.RY0402.215925 3'UTR 73 5.5
LMJ.RY0402.231351_1 LMJ.RY0402.231351 5'UTR 73 5.5

Gene Annotations

PFAM:PF00571, PF04134
PANTHER: PTHR34290
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0005515
Best arabidopsis TAIR name:AT5G50100.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Putative thiol-disulphide oxidoreductase DCC
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

High light in oxic environment, screen 1 of 1 ( 99% confidence (FDR = 6.4e-07))
Hypoxic (low light), screen 1 of 1 ( 89% confidence (FDR = 0.11))
Low nitrogen media, screen 1 of 1 ( 87% confidence (FDR = 0.13))
No zinc media, screen 1 of 1 ( 74% confidence (FDR = 0.26))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.