Insertion junction: CLIP2.045100_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045100
Chromosome:chromosome 11
Location:2654577
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g095077 (1 of 1) PF00571//PF04134 - CBS domain (CBS) // Protein of unknown function, DUF393 (DUF393) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGCATACTGCATCCAACTATCTCTCCGCCCTACCTGGTCCCAGCTA
Internal bar code:CAGGGTTAATAGACGAATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATACCCTGCGACTCCTT
Suggested primer 2:CAGTCCCATCACACTCCCAC