Insertion junction: CLIP2.005711_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005711
Chromosome:chromosome 16
Location:2338517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659050 (1 of 1) 4.2.99.20 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / SHCHC synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCAGAGGGAGGGGGGGCCGGAACAGGCGGAGAAGGCAGGTAAGGCTC
Internal bar code:TGTGAGGGTCAGTCAGACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1649
LEAP-Seq percent confirming:78.0488
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTGTGGCGTTGTGTTG
Suggested primer 2:GATAAGGCGAGGAGTGAGGC