Insertion junction: CLIP2.005724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005724
Chromosome:chromosome 6
Location:5456985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285950 5'UTR
Cre06.g286000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTACGCGGCCTGTGCACACAGGTTCAGCATCGAAGTCGCGGGTTTTG
Internal bar code:GGGAAGTCTCTTGTCCGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2637
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGCAAAGGTTCAGCAC
Suggested primer 2:GTCAGCTGTAATGGCGCATG