Insertion junction: CLIP2.005724_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005724
Chromosome:chromosome 6
Location:5456989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285950 5'UTR
Cre06.g286000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGACAGGGTGCGCCCGGACGCGGGAGGGCCGGGCCAGGTCCGGAACTG
Internal bar code:TTTGTCCTTAACCGGTATGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCTGTAATGGCGCATG
Suggested primer 2:CCCAAGCAAAGGTTCAGCAC