Insertion junction: CLIP2.005731_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005731
Chromosome:chromosome 2
Location:6229548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387000 CGL34 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAAGGAAGCGCCCACCAGCGCAGCGACCTGCTGACCACGCAATCTTGC
Internal bar code:GTATTTTCAAGGGGTAGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCCACGAATGCCTACA
Suggested primer 2:GCGGCAAACGTGAGACTTTT