Insertion junction: CLIP2.005790_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005790
Chromosome:chromosome 16
Location:7015551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673617 PRF1,PRFA1 Putative chloroplast peptide chain release factor 1; (1 of 2) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGTCTGGGCCGGTGGCCTACCCCAGTAGGTAACTCGGCCGGCGGCC
Internal bar code:CTTTGAATCGGTGGATAGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:30.2326
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCGACCATTGTTATGAC
Suggested primer 2:AGGTGGCTGGGTTGATAACG