Insertion junction: CLIP2.005807_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005807
Chromosome:chromosome 1
Location:5360086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037800 TRL7,TRX21 (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCACCTTGCACGGCCAGTTCTCGCGATAGAAGTGGCAAATCATGCGC
Internal bar code:AGGTATTTGGAAGGGGTGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCCTGGTCGCTTGTGA
Suggested primer 2:CGCTAGGCATGCAGCTATCT