Gene: Cre01.g037800
Overview
| Common name: | TRL7,TRX21 |
| Defline: | (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein |
| Description: | Shares some similarities with putative ATP binding protein. Contains a thioredoxin homology domain lacking the thioredoxin active site. |
| Synonyms: | g847.t1,TRL7,TRX21,Cre01.g037800.t1.1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g037800 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g037800-Venus-3xFLAG
Imaged strain: CSI_LW02B3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001530_1 | CLIP2.001530 | CDS | 40 | 6.1 |
| CLIP2.001885_1 | CLIP2.001885 | CDS | 80 | 6.1 |
| CLIP2.004827_1 | CLIP2.004827 | CDS | 80 | 6.1 |
| CLIP2.005083_1 | CLIP2.005083 | intron | 80 | 6.1 |
| CLIP2.005807_1 | CLIP2.005807 | intron | 80 | 6.1 |
| CLIP2.005807_2 | CLIP2.005807 | intron | 80 | 6.1 |
| CLIP2.006271_1 | CLIP2.006271 | CDS | 80 | 6.1 |
| LMJ.RY0402.067880_1 | LMJ.RY0402.067880 | CDS | 73 | 5.5 |
| LMJ.RY0402.087570_1 | LMJ.RY0402.087570 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.087570_2 | LMJ.RY0402.087570 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.130440_1 | LMJ.RY0402.130440 | intron | 73 | 5.5 |
| LMJ.RY0402.141667_1 | LMJ.RY0402.141667 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.141667_2 | LMJ.RY0402.141667 | CDS | 95 | 5.5 |
| LMJ.RY0402.146146_1 | LMJ.RY0402.146146 | intron | 58 | 5.5 |
| LMJ.RY0402.186841_1 | LMJ.RY0402.186841 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.186841_2 | LMJ.RY0402.186841 | 5'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00085 |
| PANTHER: | PTHR21148 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG1672 |
| Gene ontology terms:: | GO:0045454 |
| Best arabidopsis TAIR name: | AT2G18990 |
| Best arabidopsis TAIR symbol: | TXND9 |
| Best arabidopsis TAIR defline: | thioredoxin domain-containing protein 9 homolog |
| Phytozome Locus Page |
Phenotypes
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis, screen 3 of 5 ( 94% confidence (FDR = 0.056)) |
| Photosynthesis, screen 5 of 5 ( 75% confidence (FDR = 0.25)) |
| Photosynthesis or light sensitivity, screen 4 of 12 ( 77% confidence (FDR = 0.23)) |
| Photosynthesis or light sensitivity, screen 6 of 12 ( 86% confidence (FDR = 0.14)) |
| Photosynthesis or light sensitivity, screen 10 of 12 ( 77% confidence (FDR = 0.23)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.