Insertion junction: CLIP2.005811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005811
Chromosome:chromosome 17
Location:4502404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731350 SDR28 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.189//1.1.1.197 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // Prostaglandin-E(2) 9-reductase / Prostaglandin-E2 9-reductase // 15-hydroxyprostaglandin dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGCTTACATCAGCCGGCTTGGTCAGTCGTTAGCCAGGCATTATGCAG
Internal bar code:ATGGCGAATCGTCGAAGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGTTCCTCGTGCATTC
Suggested primer 2:CGGTAAACGCGCACAATAGG