Gene: Cre17.g731350

Overview

Common name:SDR28
Defline:Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.189//1.1.1.197 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // Prostaglandin-E(2) 9-reductase / Prostaglandin-E2 9-reductase // 15-hydroxyprostaglandin dehydrogenase (NADP(+))
Description:Possibly a
Synonyms:g17672.t1,SDR28
Chromosome:chromosome 17

Protein Localization

A plasmid for expressing Cre17.g731350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre17.g731350-Venus-3xFLAG

Imaged strain: CSI_LW05E11

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/not homogeneous/pyrenoid depleted/enriched in thylakoid

cytosol/cytosol (strong signal)

nucleus/nucleoplasm

nucleus/nucleolus

centrosome or flagella/flagella

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.005811_1 CLIP2.005811 intron 80 6.1
CLIP2.005811_2 CLIP2.005811 intron 80 6.1
CLIP2.006012_1 CLIP2.006012 intron 80 6.1
CLIP2.006012_2 CLIP2.006012 intron 80 6.1
CLIP2.006544_1 CLIP2.006544 3'UTR 63 6.1
CLIP2.006824_1 CLIP2.006824 3'UTR 80 6.1
CLIP2.006824_2 CLIP2.006824 3'UTR 80 6.1
CLIP2.006884_1 CLIP2.006884 intron 80 6.1
CLIP2.006884_2 CLIP2.006884 intron 80 6.1
LMJ.RY0402.089710_1 LMJ.RY0402.089710 intron 95 5.5
LMJ.RY0402.089710_2 LMJ.RY0402.089710 CDS 95 5.5
LMJ.RY0402.098893_1 LMJ.RY0402.098893 CDS 95 5.5
LMJ.RY0402.098893_2 LMJ.RY0402.098893 CDS 95 5.5
LMJ.RY0402.105243_2 LMJ.RY0402.105243 intron 73 5.5
LMJ.RY0402.151889_1 LMJ.RY0402.151889 intron 73 5.5
LMJ.RY0402.191950_1 LMJ.RY0402.191950 intron 95 5.5
LMJ.RY0402.191950_2 LMJ.RY0402.191950 intron 95 5.5
LMJ.RY0402.228362_3 LMJ.RY0402.228362 intron 73 5.5
LMJ.RY0402.240148_2 LMJ.RY0402.240148 intron 95 5.5
LMJ.RY0402.240148_3 LMJ.RY0402.240148 intron 95 5.5

Gene Annotations

PFAM:PF00106
PANTHER: PTHR24320 PTHR24320:SF72
KEGG_ec:EC:1.1.1.184 EC:1.1.1.189 EC:1.1.1.197
KEGG_orthology:K00079
KOG:KOG1208
Gene ontology terms::GO:0008152, GO:0016491
Best arabidopsis TAIR name:AT5G61830
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:NAD(P)-binding Rossmann-fold superfamily protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.