Insertion junction: CLIP2.006824_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006824
Chromosome:chromosome 17
Location:4505940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731350 SDR28 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.189//1.1.1.197 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // Prostaglandin-E(2) 9-reductase / Prostaglandin-E2 9-reductase // 15-hydroxyprostaglandin dehydrogenase (NADP(+)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCGATGCCATGTAACCCCACACCCGTTACGGTCGGACATGTATCAT
Internal bar code:GAATGCCAGCGGTCATGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3899
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:175
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:175

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTCTCCCAATCGAGCCG
Suggested primer 2:GCGGACGTGTGTTGTGTTTT