Insertion junction: LMJ.RY0402.191950_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.191950
Chromosome:chromosome 17
Location:4358736
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g731350 SDR28 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.189//1.1.1.197 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // Prostaglandin-E(2) 9-reductase / Prostaglandin-E2 9-reductase // 15-hydroxyprostaglandin dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAGGGCCTTTTCCCGTCGTTACAGAT
Internal bar code:GCCAGCGATAACCCACTTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:41.2976
LEAP-Seq n confirming:802
LEAP-Seq n nonconfirming:1140
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATATCAACTTTGCGGGCAC
Suggested primer 2:CAACGCACAACAAAATACGC