Insertion junction: LMJ.RY0402.151889_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.151889
Chromosome:chromosome 17
Location:4356945
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g731350 SDR28 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.184//1.1.1.189//1.1.1.197 - Carbonyl reductase (NADPH) / Xenobiotic ketone reductase // Prostaglandin-E(2) 9-reductase / Prostaglandin-E2 9-reductase // 15-hydroxyprostaglandin dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATTGACAGCAATACTCATGTTGCTTG
Internal bar code:GACCTCTGTGAGCTTTCGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:99.7954
LEAP-Seq n confirming:3902
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCGAAGATGTTTCCCT
Suggested primer 2:CTCGTAGCCAAAGCCAACTC