Insertion junction: CLIP2.005884_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005884
Chromosome:chromosome 5
Location:2183936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237400 DAE1 (1 of 1) 5.1.1.7 - Diaminopimelate epimerase; Diaminopimelate epimerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTATCAGTGCCCCCACTCCCGAAATCCGCACGCATCACGTGGGCTCT
Internal bar code:TATAATAGTGAGCTCCAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2011
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTTGCCCGCAAGTATGT
Suggested primer 2:CTCACAAGCACCACAAACGG