Insertion junction: CLIP2.005906_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005906
Chromosome:chromosome 3
Location:5589947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185550 SEBP1,SBP1 (1 of 2) 3.1.3.37 - Sedoheptulose-bisphosphatase / Sedoheptulose-1,7-bisphosphatase; Sedoheptulose-1%252C7-bisphosphatase, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACGGGGGTCGGGGCTAGGCCCAGCTCACTTCCAGACTGGCAAGCAG
Internal bar code:AATAAATTTGTTGTAACCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4779
LEAP-Seq percent confirming:55.2941
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTTGGATTTGGCGCT
Suggested primer 2:AGCCTGTGTTGGTGGTTGAA