Insertion junction: CLIP2.005923_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005923
Chromosome:chromosome 2
Location:7563547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393136 (1 of 5) PF01417 - ENTH domain (ENTH) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACTTTTGTGTACATACAATACATTTTCAGTAACTGAATACGCGTCT
Internal bar code:GGGGTTGGCGCATAAAGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATGAGGGTTTTGAGCGT
Suggested primer 2:TGAAGGGCCCAATACGCAAT