Insertion junction: CLIP2.005933_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005933
Chromosome:chromosome 9
Location:4523254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400997 (1 of 7) IPR001024 - PLAT/LH2 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGGAGCATGTCGGGTCGGGCTGTATCATGTTCCGCGGGGGAATGT
Internal bar code:TGCAGAAGTACGCGATCTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3259
LEAP-Seq percent confirming:99.0654
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGGCGGTTAAAGAGCAA
Suggested primer 2:GTTGAAGGTGCTGACGAGGA