Insertion junction: CLIP2.006001_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006001
Chromosome:chromosome 12
Location:3100943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500950 CLPP4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; active subunit of the chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCTGGCACGTTCCGCCCATATTCGGCCGTCCACACCGGGCTCTGCC
Internal bar code:GTTGTCAGGTCGTGGACGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2122
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCCAGCACGGATTTTG
Suggested primer 2:CGGGGAAAGAGATTGCTCGT