Gene: Cre12.g500950
Overview
| Common name: | CLPP4 |
| Defline: | (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; active subunit of the chloroplast ClpP complex |
| Description: | ts-lethal mutant was isolated (PMID 29743196) |
| Synonyms: | g12557.t1,Cre12.g500950.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g500950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g500950-Venus-3xFLAG
Imaged strain: CSI_LW03B11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001745_1 | CLIP2.001745 | intron | 80 | 6.1 |
| CLIP2.001745_2 | CLIP2.001745 | intron | 80 | 6.1 |
| CLIP2.002705_1 | CLIP2.002705 | 3'UTR | 80 | 6.1 |
| CLIP2.003507_1 | CLIP2.003507 | 3'UTR | 80 | 6.1 |
| CLIP2.005668_1 | CLIP2.005668 | CDS | 80 | 6.1 |
| CLIP2.005668_2 | CLIP2.005668 | CDS | 80 | 6.1 |
| CLIP2.006001_1 | CLIP2.006001 | 3'UTR | 80 | 6.1 |
| CLIP2.006648_1 | CLIP2.006648 | 3'UTR | 80 | 6.1 |
| CLIP2.006648_2 | CLIP2.006648 | 3'UTR | 80 | 6.1 |
| CLIP2.006681_1 | CLIP2.006681 | CDS | 80 | 6.1 |
| LMJ.RY0402.149943_1 | LMJ.RY0402.149943 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00574 |
| PANTHER: | PTHR10381 PTHR10381:SF24 |
| KEGG_ec: | EC:3.4.21.92 |
| KEGG_orthology: | K01358 |
| KOG: | |
| Gene ontology terms:: | GO:0004252, GO:0006508 |
| Best arabidopsis TAIR name: | AT5G45390 |
| Best arabidopsis TAIR symbol: | CLPP4,NCLPP4 |
| Best arabidopsis TAIR defline: | CLP protease P4 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.