Insertion junction: LMJ.RY0402.149943_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.149943
Chromosome:chromosome 12
Location:3003574
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g500950 CLPP4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; active subunit of the chloroplast ClpP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAATAGTGTGGCTGGGCACCGCCGGA
Internal bar code:CGTACCAAAAGGGTGCGGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:69
LEAP-Seq percent confirming:62.8205
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAAGCAACTTAGTCGGG
Suggested primer 2:GTGGGTCTCACAGCCATTCT