Insertion junction: CLIP2.006046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006046
Chromosome:chromosome 17
Location:2434974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714900 CGL11 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTACTGACTGCGCGGGGCTGTGCGTTACATGGGTGCCTGTGCCGTT
Internal bar code:TCTCTGATTCAACTGTTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2999
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCCCCAGCTACCTCAAA
Suggested primer 2:GCTTCCTAAGTGACGTGCCT