Insertion junction: CLIP2.006101_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006101
Chromosome:chromosome 1
Location:4091998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCGCCACAACCCCGATCCCTAATTATCCGCCTCCCCTACGTGCCCT
Internal bar code:ATTTTGGCCATCGCCTATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:846
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAACACCCCCTGTCAGTC
Suggested primer 2:ATCCTTCCGGCCTCCTTTTG