Insertion junction: CLIP2.006188_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006188
Chromosome:chromosome 3
Location:4689959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177350 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTGTGTGCTCTGTTGGTAGATTCTTTTAACAATCCAACGGATGCTG
Internal bar code:TGGGTATGTCGTAGCAGCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTGGACTTCGCGGTGAT
Suggested primer 2:GCGGCGATGGATATTGAGGA