Insertion junction: CLIP2.006307_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006307
Chromosome:chromosome 6
Location:4826530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280050 ROC86,XRN1 (1 of 1) K12618 - 5'-3' exoribonuclease 1 (XRN1, SEP1, KEM1); 5' to 3' exoribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGATTCAAACGTGAGGCCACTCAACCTTATGAGCTCATACAGAGGGC
Internal bar code:GGTGAATGTGTTCAATTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4495
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCTGTGTGTAAGGAC
Suggested primer 2:TCCTTGCTTGACTCCGTGTC