Insertion junction: CLIP2.006338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006338
Chromosome:chromosome 6
Location:6878610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296500 (1 of 1) PF01753//PF07719 - MYND finger (zf-MYND) // Tetratricopeptide repeat (TPR_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACCACCATGGCGCCGCCGCCCTCCTCGCCCGCCGCGCCCCGGGCCCG
Internal bar code:CTAAATCACAGTGTTCTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACGTCCTACAGGCCATG
Suggested primer 2:GCGCATTTGACCGAGATCAC