Insertion junction: CLIP2.006338_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006338
Chromosome:chromosome 6
Location:6878837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296500 (1 of 1) PF01753//PF07719 - MYND finger (zf-MYND) // Tetratricopeptide repeat (TPR_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAACCCATTCATACCCAACGCATGGAGTTGCAGTGCTGCTAAGTGTGC
Internal bar code:GTTGACAATGTCGCTTACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATTTGACCGAGATCAC
Suggested primer 2:ACAACGTCCTACAGGCCATG