Insertion junction: CLIP2.006339_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006339
Chromosome:chromosome 6
Location:5369881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285250 LHCBM6 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chloropyll a/b binding protein of LHCII type I, chloroplast precursor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCCGTGATCTCGTAGCAAGCGAAAGGAAGGTCTGATGCACGTTCCG
Internal bar code:AACGATTATATTGGAGGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTTCAGCTCAGCGAAG
Suggested primer 2:AACGCATTTGCAGTTGGGTC