Insertion junction: CLIP2.006443_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006443
Chromosome:chromosome 12
Location:6032005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534650 (1 of 66) 2.7.12.1 - Dual-specificity kinase 5'UTR
Cre12.g534700 FKB19 (1 of 1) PTHR10516:SF179 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP19, CHLOROPLASTIC; peptidyl-prolyl cis-trans isomerase, FKBP-type outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCCCCGCTTCTTCGTCGCTATTGCAACGCGCTAGGCCTACAAGTTTT
Internal bar code:GGCTTACCCTTGTTGGTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2999
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTTGCATCGCGAATTC
Suggested primer 2:GCCACAGTGGTAACTTCGGA