Gene: Cre12.g534700
Overview
| Common name: | FKB19 |
| Defline: | (1 of 1) PTHR10516:SF179 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP19, CHLOROPLASTIC; peptidyl-prolyl cis-trans isomerase, FKBP-type |
| Description: | FKBP-type peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Immunophilin); probably directed to thylakoid lumen (homology to AtFKBP19 and bipartite cTP with RR motif) |
| Synonyms: | g13150.t1,Cre12.g534700.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g534700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g534700-Venus-3xFLAG
Imaged strain: CSI_LW10F11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001480_1 | CLIP2.001480 | CDS | 80 | 6.1 |
| CLIP2.001480_2 | CLIP2.001480 | CDS | 80 | 6.1 |
| CLIP2.001543_1 | CLIP2.001543 | gene_edge/outside_mRNA | 80 | 6.1 |
| CLIP2.001543_2 | CLIP2.001543 | gene_edge/outside_mRNA | 80 | 6.1 |
| CLIP2.003172_1 | CLIP2.003172 | 3'UTR | 80 | 6.1 |
| CLIP2.003172_2 | CLIP2.003172 | 3'UTR | 80 | 6.1 |
| CLIP2.006220_1 | CLIP2.006220 | CDS | 80 | 6.1 |
| CLIP2.006443_1 | CLIP2.006443 | outside_mRNA | 80 | 6.1 |
| CLIP2.006443_2 | CLIP2.006443 | outside_mRNA | 80 | 6.1 |
| CLIP2.006934_1 | CLIP2.006934 | intron | 80 | 6.1 |
| CLIP2.006934_2 | CLIP2.006934 | intron | 80 | 6.1 |
| LMJ.RY0402.093717_2 | LMJ.RY0402.093717 | intron | 73 | 5.5 |
| LMJ.RY0402.093717_3 | LMJ.RY0402.093717 | intron | 73 | 5.5 |
| LMJ.RY0402.155774_1 | LMJ.RY0402.155774 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.172109_1 | LMJ.RY0402.172109 | intron | 95 | 5.5 |
| LMJ.RY0402.172109_2 | LMJ.RY0402.172109 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00254 |
| PANTHER: | PTHR10516 PTHR10516:SF179 |
| KEGG_ec: | EC:5.2.1.8 |
| KEGG_orthology: | |
| KOG: | KOG0552 |
| Gene ontology terms:: | GO:0006457 |
| Best arabidopsis TAIR name: | AT5G13410 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.