Insertion junction: CLIP2.006461_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006461
Chromosome:chromosome 12
Location:2107429
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g510050 CTH1,CHL27B,CTH1B,CTH1A Copper target homolog 1, chloroplast precursor%252C functional variant; (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAGCAACCTTGATGCCGTCGCGCATAACCTTGAAGCCCTCAACCTCC
Internal bar code:AATGAAAGGAGGTACGCCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6105
LEAP-Seq percent confirming:35.7798
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGCAATGAGACTCCAGA
Suggested primer 2:CTGGCACCAGTTCTCGAAGT