Insertion junction: CLIP2.006546_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006546
Chromosome:chromosome 16
Location:6782893
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g672300 (1 of 1) PTHR13711//PTHR13711:SF182 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED; High mobility group protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCATTGCACCTGCCGGCCCACTCCCCAACGCACCTGCGCCATGGTCT
Internal bar code:TGTGCGGAGTACAAATTGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGGATGCCAAGAGGGTG
Suggested primer 2:CCTCCAACCAAAACGCACAG