Insertion junction: CLIP2.006614_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006614
Chromosome:chromosome 10
Location:1042793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425050 ROC59,ROC28 (1 of 1) K11807 - WD and tetratricopeptide repeats protein 1 (WDTC1); Rhythm Of Chloroplast 59 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATTGGAAAAAAGCAGGAAAAGCAGGACCACCAATCTGTTGGTACGAG
Internal bar code:GTTCTGATGTATGTAAAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AATTGGGCTACCTTGCTCCC
Suggested primer 2:CAAATGCGAGTGATGGCGAG