Insertion junction: CLIP2.006643_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006643
Chromosome:plastome
Location:189874
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802332 ChreCp067,2717046,psaC photosystem I iron-sulfur center; (1 of 1) K02691//K05575 - photosystem I subunit VII (psaC) // NAD(P)H-quinone oxidoreductase subunit 4 (ndhD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATGGAACCATTTCTAAAACATCTAATGGACAAGCACGTACACATT
Internal bar code:CAACATAGCGTTGAGGCTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCGGGATAGCTCAGTTG
Suggested primer 2:GCCTTTGGCTGGAAGAGTCT