Insertion junction: CLIP2.006684_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006684
Chromosome:chromosome 6
Location:4823920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280050 ROC86,XRN1 (1 of 1) K12618 - 5'-3' exoribonuclease 1 (XRN1, SEP1, KEM1); 5' to 3' exoribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTTAAGGCGGTGAGCTCGGTCCGCAGCACGCTGCTGTCCGCGGAGG
Internal bar code:TGAGGGACCACAGTTCATGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCAGCAGAAGCAGTAG
Suggested primer 2:CTGGTCAACCTGGACAGCAT