Insertion junction: CLIP2.006689_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006689
Chromosome:chromosome 12
Location:7611839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555951 PYRD1,RFD1 putative riboflavin metabolism-associated deaminase; (1 of 2) 3.5.4.26 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCCCCCACCTTGCCGTCCTTCACAATGACGCAGCCCACAGCAGGGT
Internal bar code:CTAGTAAACGTTTCGTTGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4779
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGCGGCTTTCGAATCTC
Suggested primer 2:GGATCATACTCGCTGCGTCA