Insertion junction: CLIP2.006779_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006779
Chromosome:chromosome 12
Location:4142529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517350 LSD1 (1 of 1) PTHR31747//PTHR31747:SF1 - FAMILY NOT NAMED // PROTEIN LOL1; zinc-finger protein LSD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTACAAGGCAGTTGCTGCCCAAGTCAGACTTACTTGGGGATACATCAG
Internal bar code:TGTTTATCGAGGGACAGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1903
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGATTAGCTTCACACTG
Suggested primer 2:CGTCTGTGAGGAAACCGACA