| Common name: | LSD1 |
| Defline: | (1 of 1) PTHR31747//PTHR31747:SF1 - FAMILY NOT NAMED // PROTEIN LOL1; zinc-finger protein LSD1 |
| Description: | Zinc-finger protein LSD1; Orthologous to LSD1 in Arabidopsis; AtLSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death [PMID: 9054508] |
| Synonyms: | Cre12.g517350.t1.1,g12758.t1 |
| Chromosome: | chromosome 12 |
A plasmid for expressing Cre12.g517350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g517350-Venus-3xFLAG
No localization data is available in our datasets for this protein.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001232_1 | CLIP2.001232 | intron | 80 | 6.1 |
| CLIP2.001232_2 | CLIP2.001232 | intron | 80 | 6.1 |
| CLIP2.001861_1 | CLIP2.001861 | intron | 80 | 6.1 |
| CLIP2.003313_1 | CLIP2.003313 | CDS | 80 | 6.1 |
| CLIP2.005320_1 | CLIP2.005320 | intron | 80 | 6.1 |
| CLIP2.006779_1 | CLIP2.006779 | intron | 80 | 6.1 |
| CLIP2.006779_2 | CLIP2.006779 | intron | 80 | 6.1 |
| LMJ.RY0402.076546_1 | LMJ.RY0402.076546 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.114954_1 | LMJ.RY0402.114954 | CDS | 73 | 5.5 |
| LMJ.RY0402.131712_1 | LMJ.RY0402.131712 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.131712_2 | LMJ.RY0402.131712 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.196849_1 | LMJ.RY0402.196849 | intron | 95 | 5.5 |
| LMJ.RY0402.196849_2 | LMJ.RY0402.196849 | intron | 95 | 5.5 |
| LMJ.RY0402.198243_1 | LMJ.RY0402.198243 | CDS | 73 | 5.5 |
| LMJ.RY0402.207670_1 | LMJ.RY0402.207670 | intron | 73 | 5.5 |
| LMJ.RY0402.208237_1 | LMJ.RY0402.208237 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.238814_1 | LMJ.RY0402.238814 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.255175_1 | LMJ.RY0402.255175 | 3'UTR | 73 | 5.5 |
| PFAM: | PF06943 |
| PANTHER: | PTHR31747 PTHR31747:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G20380 |
| Best arabidopsis TAIR symbol: | LSD1 |
| Best arabidopsis TAIR defline: | LSD1 zinc finger family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.