Insertion junction: CLIP2.006779_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006779
Chromosome:chromosome 12
Location:4142531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517350 LSD1 (1 of 1) PTHR31747//PTHR31747:SF1 - FAMILY NOT NAMED // PROTEIN LOL1; zinc-finger protein LSD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGCGCAAGCAGGCCGTGTACGAGGCCAGGTGCCCCTCGCCTCCTCG
Internal bar code:TGTTTATCGAGGGACAGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGTGAGGAAACCGACA
Suggested primer 2:GCGCGATTAGCTTCACACTG