Insertion junction: CLIP2.006781_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006781
Chromosome:chromosome 6
Location:8418833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308150 DNJ23 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11); DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGAGGGGTAGGAGAGGGCAGGGGCGCGCGGCGCACCCCTCCAAGCGG
Internal bar code:CGCATTAACGCGGTTGTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1002
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACAAAGCACGCTGTCG
Suggested primer 2:CACAGACCAGTACCTGCAGG