Insertion junction: CLIP2.006829_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006829
Chromosome:chromosome 1
Location:3862806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025400 HYD3,HYDIN1 (1 of 1) K17570 - hydrocephalus-inducing protein (HYDIN); Hydrocephalus 3-Like Protein Hydin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCGCAGGTGCAGGTGCGGCTGAACGACGGCACGCCGCCGCCGGACC
Internal bar code:TGGTTCCGTACAATCTAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATTTCAATCCGAGCGTC
Suggested primer 2:GAGTTCAGCCTCAAGAGCGT