Gene: Cre01.g025400 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g583.t1,Cre01.g025400.t1.1
Chromosome:chromosome_1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.040675_1 LMJ.RY0402.040675 sense intron 95
LMJ.RY0402.046330_1 LMJ.RY0402.046330 antisense CDS 95
LMJ.RY0402.046330_2 LMJ.RY0402.046330 antisense CDS 95
LMJ.RY0402.055065_1 LMJ.RY0402.055065 sense CDS 73
LMJ.RY0402.059521_1 LMJ.RY0402.059521 sense CDS 95
LMJ.RY0402.059521_2 LMJ.RY0402.059521 sense CDS 95
LMJ.RY0402.094020_1 LMJ.RY0402.094020 antisense CDS 73
LMJ.RY0402.122046_1 LMJ.RY0402.122046 sense 5'UTR 73
LMJ.RY0402.146720_1 LMJ.RY0402.146720 sense intron 95
LMJ.RY0402.146720_2 LMJ.RY0402.146720 sense intron 95
LMJ.RY0402.163529_1 LMJ.RY0402.163529 sense CDS 95
LMJ.RY0402.163529_2 LMJ.RY0402.163529 sense CDS 95
LMJ.RY0402.168991_1 LMJ.RY0402.168991 sense CDS 95
LMJ.RY0402.168991_2 LMJ.RY0402.168991 sense CDS 95
LMJ.RY0402.171437_1 LMJ.RY0402.171437 antisense CDS 58
LMJ.RY0402.171944_1 LMJ.RY0402.171944 sense 3'UTR 73
LMJ.RY0402.171945_1 LMJ.RY0402.171945 antisense CDS 95
LMJ.RY0402.171945_2 LMJ.RY0402.171945 antisense CDS 95
LMJ.RY0402.193315_1 LMJ.RY0402.193315 sense CDS 95
LMJ.RY0402.193315_2 LMJ.RY0402.193315 antisense CDS 95
LMJ.RY0402.230425_1 LMJ.RY0402.230425 antisense CDS 95
LMJ.RY0402.230425_2 LMJ.RY0402.230425 antisense CDS 95
LMJ.RY0402.235619_1 LMJ.RY0402.235619 antisense intron 73
LMJ.RY0402.251310_1 LMJ.RY0402.251310 sense CDS 73
LMJ.RY0402.256606_1 LMJ.RY0402.256606 sense CDS 73

Gene Annotations

PFAM:
PANTHER: PTHR23053
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 97% confidence (FDR = 0.022))
Paromomycin, screen 4 of 6 ( 85% confidence (FDR = 0.15))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.