Insertion junction: CLIP2.015882_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015882
Chromosome:chromosome 1
Location:3868113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025400 HYD3,HYDIN1 (1 of 1) K17570 - hydrocephalus-inducing protein (HYDIN); Hydrocephalus 3-Like Protein Hydin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGGTCGAACGTGACGTTGACAGTGCCGCTCTCCTCCAGGTCCAGAG
Internal bar code:TGAGTCGTATTCTGGCGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACATGGGCCGCAAGAT
Suggested primer 2:CGCACCTTGATGACCTCCTT